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Welcome to PlanMine, an integrated web resource of data & tools to mine Planarian biology.

If you are short of time, just navigate through our set of quick tips on general utility and specific features. For a basic overview of the site and its features try the User Guide, it takes about ten minutes.


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Gene annotations

Please check out the published set of genome annotations for Schmidtea mediterranea! Here is one example of Gene Prediction - SMESG000004222.1 and Transcript - SMEST004222001.1.

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Planmine transcriptomes.
Species:

Phylogeny of PlanMine Species

Clades
Flatworms : Planarians
: Parasitic flatworms
: Macrostomida
Outgroups : Lophotrocozoa
: Nematoda
: Insects
: Vertebrata
Pre-configured phylogeny view options:
 
Planarians Flatworms All

Flatworm Species in PlanMine

News & Updates

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To cite PlanMine, please refer to the following publication:

Rozanski, A., Moon, H., Brandl, H., Martín-Durán, J. M., Grohme, M., Hüttner, K., Bartscherer, K., Henry, I., & Rink, J. C.
PlanMine 3.0—improvements to a mineable resource of flatworm biology and biodiversity
Nucleic Acids Research, gky1070. doi:10.1093/nar/gky1070 (2018)